PF02622


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02622, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02622
Description Uncharacterized ACR, COG1678

Occurence in the database

PF02622 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2002 FBDBKF_15055 20734 21267 -1 algH YqgE/AlgH family protein Morganella morganii S1
1 group_2002 EHELCC_11190 63639 64172 1 algH YqgE/AlgH family protein Morganella morganii S2
2 group_2002 NLDBIP_11535 63639 64172 1 algH YqgE/AlgH family protein Morganella morganii S4
3 group_2002 LHKJJB_11395 63639 64172 1 algH YqgE/AlgH family protein Morganella morganii S3
4 group_2002 HKOGLL_10005 63639 64172 1 algH YqgE/AlgH family protein Morganella morganii S5
5 group_2002 F4V73_RS12395 64298 64861 1 YqgE/AlgH family protein Morganella psychrotolerans
6 group_2002 PMI_RS01620 388298 388861 -1 YqgE/AlgH family protein Proteus mirabilis HI4320