PF02492


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02492, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02492
Description CobW/HypB/UreG, nucleotide-binding domain

Occurence in the database

PF02492 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1158 FBDBKF_06640 169169 169804 -1 ureG urease accessory protein UreG Morganella morganii S1
1 group_1290 FBDBKF_07850 97328 98287 1 yjiA GTPase Morganella morganii S1
2 group_2276 FBDBKF_17495 33219 34322 -1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S1
3 group_1158 EHELCC_09685 169741 170376 -1 ureG urease accessory protein UreG Morganella morganii S2
4 group_1290 EHELCC_13680 71522 72481 1 yjiA GTPase Morganella morganii S2
5 group_2276 EHELCC_17390 33219 34322 -1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S2
6 group_1158 NLDBIP_10065 169741 170376 -1 ureG urease accessory protein UreG Morganella morganii S4
7 group_1290 NLDBIP_14125 92397 93356 1 yjiA GTPase Morganella morganii S4
8 group_2276 NLDBIP_17805 8474 9577 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S4
9 group_1158 LHKJJB_07690 46862 47497 1 ureG urease accessory protein UreG Morganella morganii S3
10 group_1290 LHKJJB_08725 66393 67352 -1 yjiA GTPase Morganella morganii S3
11 group_2276 LHKJJB_17725 8472 9575 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S3
12 group_1158 HKOGLL_07240 46862 47497 1 ureG urease accessory protein UreG Morganella morganii S5
13 group_1290 HKOGLL_08275 66393 67352 -1 yjiA GTPase Morganella morganii S5
14 group_2276 HKOGLL_17735 8472 9575 1 hypB hydrogenase nickel incorporation protein HypB Morganella morganii S5
15 group_1290 F4V73_RS13190 257321 258280 -1 yjiA GTPase Morganella psychrotolerans
16 group_1158 F4V73_RS15295 44517 45155 1 ureG urease accessory protein UreG Morganella psychrotolerans
17 group_2276 F4V73_RS16670 157127 158248 -1 hypB hydrogenase nickel incorporation protein HypB Morganella psychrotolerans
18 group_2276 PMI_RS00180 59419 60615 1 hypB hydrogenase nickel incorporation protein HypB Proteus mirabilis HI4320
19 group_1290 PMI_RS00695 178444 179421 1 yjiA GTPase Proteus mirabilis HI4320
20 group_1158 PMI_RS18350 4028297 4028914 1 ureG urease accessory protein UreG Proteus mirabilis HI4320