Orthogroup:group_1347



Homologs in group_1347

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08345 FBDBKF_08345 Morganella morganii S1 dapF diaminopimelate epimerase
EHELCC_13180 EHELCC_13180 Morganella morganii S2 dapF diaminopimelate epimerase
NLDBIP_13520 NLDBIP_13520 Morganella morganii S4 dapF diaminopimelate epimerase
LHKJJB_13035 LHKJJB_13035 Morganella morganii S3 dapF diaminopimelate epimerase
HKOGLL_11995 HKOGLL_11995 Morganella morganii S5 dapF diaminopimelate epimerase
F4V73_RS09545 F4V73_RS09545 Morganella psychrotolerans dapF diaminopimelate epimerase
PMI_RS16595 PMI_RS16595 Proteus mirabilis HI4320 dapF diaminopimelate epimerase

Distribution of group_1347 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1347 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1347

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1347.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dapF 7

Product

# Product Occurence
1 diaminopimelate epimerase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0253 7 E Amino acid transport and metabolism (E) Diaminopimelate epimerase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01678 7 Diaminopimelate epimerase

Annotations of the 424 SwissProt hits

Annotation Number of occurrences
Diaminopimelate epimerase 418
Diaminopimelate epimerase 1 1
Diaminopimelate epimerase 2 1
Diaminopimelate epimerase, chloroplastic 2
O-ureido-serine racemase 1
Putative diaminopimelate epimerase, chloroplastic 1

Protein length

Unique protein length 274

Protein length distribution