PF02203


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02203, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 23 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02203
Description Tar ligand binding domain homologue

Occurence in the database

PF02203 is associated with 23 different proteins (see tab "Protein list" and "Profile")
The 23 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_59 FBDBKF_00780 141430 143004 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
1 group_59 FBDBKF_00785 143117 144802 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
2 group_3044 FBDBKF_18180 1914 3473 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S1
3 group_59 EHELCC_00760 164066 165751 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
4 group_59 EHELCC_00765 165864 167438 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
5 group_3044 EHELCC_18215 1787 3346 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S2
6 group_59 NLDBIP_02695 512698 514272 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
7 group_59 NLDBIP_02700 514385 516070 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
8 group_3044 NLDBIP_18140 1988 3547 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S4
9 group_59 LHKJJB_04210 119939 121513 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
10 group_59 LHKJJB_04215 121626 123311 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
11 group_3044 LHKJJB_18335 1826 3385 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S3
12 group_59 HKOGLL_02830 164271 165956 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
13 group_59 HKOGLL_02835 166069 167643 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
14 group_3044 HKOGLL_18070 1804 3363 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S5
15 group_3044 F4V73_RS01725 382163 383722 1 methyl-accepting chemotaxis protein Morganella psychrotolerans
16 group_59 F4V73_RS06780 1406352 1407926 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
17 group_59 F4V73_RS06785 1408042 1409727 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
18 group_59 F4V73_RS10015 108871 110526 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
19 group_2454 PMI_RS08130 1775601 1777247 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
20 group_2454 PMI_RS08135 1777307 1779013 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
21 group_2454 PMI_RS13870 3080908 3082599 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
22 group_2454 PMI_RS13875 3083055 3084782 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320