PF02082


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02082, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02082
Description Iron-dependent Transcriptional regulator

Occurence in the database

PF02082 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_527 FBDBKF_01140 212011 212502 -1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella morganii S1
1 group_1370 FBDBKF_08480 77327 77707 1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella morganii S1
2 group_527 EHELCC_00405 96366 96857 1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella morganii S2
3 group_1370 EHELCC_13045 86018 86398 -1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella morganii S2
4 group_527 NLDBIP_03055 583279 583770 -1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella morganii S4
5 group_1370 NLDBIP_13385 86018 86398 -1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella morganii S4
6 group_527 LHKJJB_04570 190520 191011 -1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella morganii S3
7 group_1370 LHKJJB_13170 76045 76425 1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella morganii S3
8 group_527 HKOGLL_02475 96571 97062 1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella morganii S5
9 group_1370 HKOGLL_11860 86018 86398 -1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella morganii S5
10 group_527 F4V73_RS07210 1500029 1500520 -1 iscR Fe-S cluster assembly transcriptional regulator IscR Morganella psychrotolerans
11 group_1370 F4V73_RS09700 43466 43894 1 nsrR nitric oxide-sensing transcriptional repressor NsrR Morganella psychrotolerans
12 group_527 PMI_RS09185 2002123 2002617 -1 iscR Fe-S cluster assembly transcriptional regulator IscR Proteus mirabilis HI4320
13 group_1370 PMI_RS16775 3698833 3699261 1 nsrR nitric oxide-sensing transcriptional repressor NsrR Proteus mirabilis HI4320