Orthogroup:group_604


Homologs in group_604

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01890 FBDBKF_01890 Morganella morganii S1 ychF redox-regulated ATPase YchF
EHELCC_02360 EHELCC_02360 Morganella morganii S2 ychF redox-regulated ATPase YchF
NLDBIP_01100 NLDBIP_01100 Morganella morganii S4 ychF redox-regulated ATPase YchF
LHKJJB_00935 LHKJJB_00935 Morganella morganii S3 ychF redox-regulated ATPase YchF
HKOGLL_00975 HKOGLL_00975 Morganella morganii S5 ychF redox-regulated ATPase YchF
F4V73_RS04235 F4V73_RS04235 Morganella psychrotolerans ychF redox-regulated ATPase YchF
PMI_RS05230 PMI_RS05230 Proteus mirabilis HI4320 ychF redox-regulated ATPase YchF

Distribution of group_604 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_604 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_604

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_604.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ychF 7

Product

# Product Occurence
1 redox-regulated ATPase YchF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0012 7 J Translation, ribosomal structure and biogenesis (J) Ribosome-binding ATPase YchF, GTP1/OBG family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06942 7 ribosome-binding ATPase - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01926 7 50S ribosome-binding GTPase
PF06071 7 Protein of unknown function (DUF933)

Annotations of the 537 SwissProt hits

Annotation Number of occurrences
GTP-binding protein 10 homolog 1
GTP-binding protein OBGC, chloroplastic 1
GTPase Obg 495
GTPase Obg/CgtA 1
Obg-like ATPase 1 16
Obg-like ATPase homolog 2
Probable GTP-binding protein OBGC1, chloroplastic 2
Probable GTP-binding protein OBGC2 1
Probable GTP-binding protein OBGM, mitochondrial 2
Putative GTPase Obg 1
Ribosome-binding ATPase YchF 12
Uncharacterized GTP-binding protein C428.15 1
Uncharacterized GTP-binding protein MJ1332 1
Uncharacterized GTP-binding protein YGR210C 1

Protein length

Unique protein length 363

Protein length distribution