PF01725


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01725, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01725
Description Ham1 family

Occurence in the database

PF01725 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1997 FBDBKF_15030 17303 17899 -1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella morganii S1
1 group_1997 EHELCC_11215 67007 67603 1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella morganii S2
2 group_1997 NLDBIP_11560 67007 67603 1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella morganii S4
3 group_1997 LHKJJB_11420 67007 67603 1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella morganii S3
4 group_1997 HKOGLL_10030 67007 67603 1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella morganii S5
5 group_1997 F4V73_RS12420 67700 68296 1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Morganella psychrotolerans
6 group_1997 PMI_RS01590 384120 384713 -1 XTP/dITP diphosphatase Proteus mirabilis HI4320