Orthogroup:group_2035



Homologs in group_2035

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15245 FBDBKF_15245 Morganella morganii S1 csrA carbon storage regulator CsrA
EHELCC_11000 EHELCC_11000 Morganella morganii S2 csrA carbon storage regulator CsrA
NLDBIP_11345 NLDBIP_11345 Morganella morganii S4 csrA carbon storage regulator CsrA
LHKJJB_11205 LHKJJB_11205 Morganella morganii S3 csrA carbon storage regulator CsrA
HKOGLL_09815 HKOGLL_09815 Morganella morganii S5 csrA carbon storage regulator CsrA
F4V73_RS12200 F4V73_RS12200 Morganella psychrotolerans csrA carbon storage regulator CsrA
PMI_RS01805 PMI_RS01805 Proteus mirabilis HI4320 csrA carbon storage regulator CsrA

Distribution of group_2035 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2035 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2035

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2035.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 csrA 7

Product

# Product Occurence
1 carbon storage regulator CsrA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1551 7 T Signal transduction mechanisms (T) sRNA-binding carbon storage regulator CsrA

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02599 7 Global regulator protein family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG010906 7 carbon storage regulator CsrA VF0261 Regulation

Annotations of the 278 SwissProt hits

Annotation Number of occurrences
Carbon storage regulator 1
Translational regulator CsrA 270
Translational regulator CsrA 1 2
Translational regulator CsrA 2 2
Translational regulator CsrA 3 1
Translational regulator CsrA1 1
Translational regulator CsrA2 1

Protein length

Min length 62
Max length 63
Mean length (sd) 62.9 (0.4)
Median length 63.0

Protein length distribution