PF01507


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01507, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 4 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01507
Description Phosphoadenosine phosphosulfate reductase family

Occurence in the database

PF01507 is associated with 4 different proteins (see tab "Protein list" and "Profile")
The 4 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3741 FBDBKF_12485 15472 16698 1 ybdN DUF3440 domain-containing protein Morganella morganii S1
1 group_3741 PMI_RS04790 1052446 1053672 -1 DUF3440 domain-containing protein Proteus mirabilis HI4320
2 group_3905 PMI_RS11065 2434696 2435604 -1 cysD sulfate adenylyltransferase subunit CysD Proteus mirabilis HI4320
3 group_3905 PMI_RS11075 2437258 2437989 -1 phosphoadenylyl-sulfate reductase Proteus mirabilis HI4320