Homologs in group_3741

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12485 FBDBKF_12485 84.6 Morganella morganii S1 ybdN DUF3440 domain-containing protein

Distribution of the homologs in the orthogroup group_3741

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3741

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77216 5.61e-166 474 54 3 403 4 ybdN Uncharacterized protein YbdN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04790
Feature type CDS
Gene -
Product DUF3440 domain-containing protein
Location 1052446 - 1053672 (strand: -1)
Length 1227 (nucleotides) / 408 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3741
Orthogroup size 2
N. genomes 2

Actions

Genomic region

Domains

PF01507 Phosphoadenosine phosphosulfate reductase family
PF11922 Domain of unknown function (DUF3440)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3969 General function prediction only (R) R Predicted phosphoadenosine phosphosulfate sulfurtransferase, contains C-terminal DUF3440 domain

Protein Sequence

MSLKRKIALGKNVLEAAQERVQWIFDTFEQITLSFSGGKDSTALFHLVAAQARKQHRKFNVMFLDWEVQYSATIDHIIKMKSIYQDCIERFYWIALPITTESGISQYEPTWTAWESGKKWVRQPPEDAITDPHFFPFYHPNMLFEDFTPAFNQWITGNHRSSIILLGIRADESLNRFIAISNNRKLRYADDIPWTTASAEGFYYMAYPIYDWHVKDIWTYIARFNLPYNPIYDLMHQAGVSLSQMRICEPFGPEQRKGLWLYHVLEPETWSLACERVSGADAGMLYTNPRNKSGFYGRHQISKPSHHTWKSYAHFLLASLPEKTAEHYRNKIAVYLRWYAERDYPNGIPDAQEGDTSTKQIPSWRRICKTILRNDFWCRTLAFSPTKSHCYDRYFKRIQGKRKDWQLI

Flanking regions ( +/- flanking 50bp)

TATGATTAAGTGATAATACTAACATTAGCTAATCTATTTTGGTGATAGTTATGTCTTTGAAACGTAAAATTGCGCTGGGGAAAAATGTATTAGAAGCTGCTCAAGAGAGAGTCCAGTGGATATTTGATACTTTTGAACAAATCACTCTCTCCTTTTCGGGAGGGAAAGATTCTACTGCGCTTTTTCATCTTGTTGCCGCACAAGCGCGAAAACAACATAGAAAATTTAATGTGATGTTTCTTGATTGGGAAGTTCAATATTCTGCGACTATAGATCATATTATAAAAATGAAATCTATCTACCAAGATTGTATTGAACGGTTTTACTGGATAGCACTCCCTATCACCACTGAAAGTGGCATTTCTCAATATGAACCTACATGGACAGCATGGGAGTCTGGTAAAAAATGGGTAAGACAACCGCCAGAAGATGCGATAACTGACCCTCACTTTTTCCCTTTTTATCACCCAAATATGCTTTTTGAAGATTTTACCCCTGCATTTAACCAGTGGATCACAGGTAATCATCGCAGTTCGATTATCCTGCTAGGCATAAGAGCGGATGAATCTTTAAACCGATTTATTGCCATTAGTAATAATCGAAAGTTACGTTATGCCGATGATATTCCTTGGACAACGGCATCAGCAGAAGGCTTTTATTATATGGCCTACCCTATTTATGATTGGCATGTTAAAGATATCTGGACTTATATAGCGCGTTTCAATTTACCCTATAACCCTATTTATGATCTGATGCACCAAGCGGGCGTTAGTTTAAGTCAAATGCGTATTTGTGAACCTTTTGGGCCAGAGCAACGCAAGGGACTATGGTTATATCATGTGCTAGAGCCTGAAACATGGAGTCTTGCTTGTGAACGAGTGAGTGGAGCTGATGCCGGAATGTTATATACGAATCCTCGTAATAAATCAGGTTTCTATGGGCGACATCAAATTAGCAAACCTTCCCATCATACGTGGAAATCTTATGCTCACTTTTTATTAGCCAGTTTACCAGAGAAAACAGCAGAACATTATCGTAATAAAATAGCGGTCTATCTTCGCTGGTATGCCGAACGAGATTACCCAAATGGCATACCTGATGCACAAGAAGGTGATACTAGCACTAAACAGATACCTTCTTGGCGACGAATTTGTAAGACCATCTTGCGTAACGATTTTTGGTGTAGAACATTAGCATTTAGTCCTACTAAATCACACTGTTATGATCGATATTTCAAACGGATACAAGGAAAACGAAAAGACTGGCAACTTATTTAGCAAGGTGTGAATATGACCATTGAAACTATAATTTCTGTTTTAAAAGAGTA