Homologs in group_3741

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04790 PMI_RS04790 84.6 Proteus mirabilis HI4320 - DUF3440 domain-containing protein

Distribution of the homologs in the orthogroup group_3741

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3741

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77216 2.63e-168 480 54 3 403 4 ybdN Uncharacterized protein YbdN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12485
Feature type CDS
Gene ybdN
Product DUF3440 domain-containing protein
Location 15472 - 16698 (strand: 1)
Length 1227 (nucleotides) / 408 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3741
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF01507 Phosphoadenosine phosphosulfate reductase family
PF11922 Domain of unknown function (DUF3440)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3969 General function prediction only (R) R Predicted phosphoadenosine phosphosulfate sulfurtransferase, contains C-terminal DUF3440 domain

Protein Sequence

MSCKRKIPLGENVLDAAQKRIEWLFDTFEQITLSFSGGKDSTVLFHLVAAEARRRHRKFNVMFLDWEVQYSATISHVAAMKSLYADCTQRFYWIALPVTTESGISQYEPAWTAWEPGKKWVRQPPEDAITDPDFFPFYHPGIIFEDFTPSFNQWITGDHHSSVILLGIRADESLNRFLAISNNRKLRYADDIPWTTASPEGFYYMGYPIYDWHVKDIWTYISRSRLPYNTIYDLMHQAGVSLSKMRICEPFGPEQRRGLWLYHVLEPETWSLACARVSGADAGMLYTRPGNKAGFFGSRQISKPAGHTWKSYARFLLASLPEKTAEHYRNKIAVYLHWYAERDYPDGIPDEQSGDTGSKDIPSWRRICKTLLRNDFWCRSLAFSPTKSHCYDKYCRRIQAKRKDWQLI

Flanking regions ( +/- flanking 50bp)

AATATGATTAGATATTAATATTATTAACTAACTATATTCCGGTAATCGAGATGTCCTGCAAACGTAAAATTCCGCTCGGAGAAAACGTGCTGGATGCAGCACAAAAGCGGATTGAATGGCTGTTTGATACTTTTGAACAAATCACCCTTTCCTTTTCCGGCGGCAAAGACTCCACCGTTCTTTTTCATCTGGTTGCAGCAGAGGCCAGAAGACGGCACCGGAAATTCAATGTCATGTTTCTCGACTGGGAAGTACAGTATTCCGCTACTATCAGCCATGTTGCTGCCATGAAATCACTCTATGCCGACTGTACTCAGCGGTTTTACTGGATAGCGCTGCCTGTCACCACCGAAAGTGGTATTTCCCAGTATGAACCGGCCTGGACGGCCTGGGAACCCGGTAAAAAATGGGTCCGGCAACCACCGGAAGATGCCATTACTGACCCTGATTTCTTTCCCTTCTATCATCCGGGGATTATTTTTGAAGATTTTACTCCCTCATTTAATCAGTGGATCACCGGAGATCATCACAGCTCTGTCATACTGCTGGGGATCCGCGCCGATGAATCATTAAACCGGTTTCTCGCCATCAGTAATAACCGGAAACTGCGTTATGCCGATGATATCCCGTGGACAACCGCATCACCGGAAGGATTCTATTATATGGGTTACCCGATTTATGACTGGCATGTGAAAGATATCTGGACTTATATTTCCCGCAGCAGACTTCCTTACAATACGATTTATGATCTGATGCATCAGGCCGGTGTCAGTCTCAGTAAAATGCGGATCTGTGAACCCTTCGGCCCGGAACAGCGCAGAGGGTTGTGGCTGTATCATGTCCTGGAGCCGGAAACATGGAGCCTTGCCTGTGCGCGGGTCAGTGGTGCGGATGCCGGTATGTTGTACACACGACCCGGAAATAAAGCCGGTTTTTTCGGTTCCCGCCAAATCAGCAAGCCTGCCGGTCATACCTGGAAATCCTACGCCCGTTTTTTACTGGCCAGCCTGCCGGAAAAAACCGCAGAACACTACCGGAACAAAATTGCGGTCTATCTGCACTGGTATGCAGAGCGGGATTATCCGGACGGGATCCCGGATGAACAATCCGGTGATACAGGCAGTAAAGATATTCCGTCCTGGCGGCGGATCTGCAAAACCCTTTTACGTAATGATTTCTGGTGCCGCTCACTGGCATTCAGCCCGACCAAATCTCATTGCTACGACAAGTATTGCAGGCGCATACAGGCAAAACGCAAAGACTGGCAACTGATATAGCAGACGGATAACATAAATATGAAAACAGTACTCTCTTTACTGGAAAACTA