PF01475


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01475, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01475
Description Ferric uptake regulator family

Occurence in the database

PF01475 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1533 FBDBKF_09905 76094 76543 1 fur ferric iron uptake transcriptional regulator Morganella morganii S1
1 group_2424 FBDBKF_19555 18293 18811 -1 zur zinc uptake transcriptional repressor Zur Morganella morganii S1
2 group_1533 EHELCC_04705 268059 268508 1 fur ferric iron uptake transcriptional regulator Morganella morganii S2
3 group_2424 EHELCC_16500 18293 18811 -1 zur zinc uptake transcriptional repressor Zur Morganella morganii S2
4 group_1533 NLDBIP_04705 267855 268304 1 fur ferric iron uptake transcriptional regulator Morganella morganii S4
5 group_2424 NLDBIP_16710 18293 18811 -1 zur zinc uptake transcriptional repressor Zur Morganella morganii S4
6 group_1533 LHKJJB_13925 67074 67523 -1 fur ferric iron uptake transcriptional regulator Morganella morganii S3
7 group_2424 LHKJJB_16760 49699 50217 1 zur zinc uptake transcriptional repressor Zur Morganella morganii S3
8 group_1533 HKOGLL_12610 76875 77324 1 fur ferric iron uptake transcriptional regulator Morganella morganii S5
9 group_2424 HKOGLL_18855 18293 18811 -1 zur zinc uptake transcriptional repressor Zur Morganella morganii S5
10 group_1533 F4V73_RS00445 96077 96523 -1 fur ferric iron uptake transcriptional regulator Morganella psychrotolerans
11 group_2424 F4V73_RS18570 53508 54020 1 zur zinc uptake transcriptional repressor Zur Morganella psychrotolerans
12 group_1533 PMI_RS02675 585792 586238 -1 fur ferric iron uptake transcriptional regulator Proteus mirabilis HI4320
13 group_2424 PMI_RS13545 3005138 3005668 1 zur zinc uptake transcriptional repressor Zur Proteus mirabilis HI4320