PF01323


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01323, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01323
Description DSBA-like thioredoxin domain

Occurence in the database

PF01323 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1705 FBDBKF_11885 28594 29217 -1 dsbA thiol:disulfide interchange protein DsbA Morganella morganii S1
1 group_1705 EHELCC_14420 105488 106111 1 dsbA thiol:disulfide interchange protein DsbA Morganella morganii S2
2 group_1705 NLDBIP_15515 109425 110048 1 dsbA thiol:disulfide interchange protein DsbA Morganella morganii S4
3 group_1705 LHKJJB_15095 28594 29217 -1 dsbA thiol:disulfide interchange protein DsbA Morganella morganii S3
4 group_1705 HKOGLL_14215 15257 15880 -1 dsbA thiol:disulfide interchange protein DsbA Morganella morganii S5
5 group_1543 F4V73_RS00335 78216 78944 1 DsbA family protein Morganella psychrotolerans
6 group_1705 F4V73_RS14770 188248 188871 1 dsbA thiol:disulfide interchange protein DsbA Morganella psychrotolerans
7 group_2006 PMI_RS01640 391654 392319 -1 DsbA family protein Proteus mirabilis HI4320
8 group_1705 PMI_RS13970 3103677 3104300 -1 dsbA thiol:disulfide interchange protein DsbA Proteus mirabilis HI4320