PF01288


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01288, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01288
Description 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)

Occurence in the database

PF01288 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1307 FBDBKF_08005 133477 133977 -1 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Morganella morganii S1
1 group_1307 EHELCC_13835 107671 108171 -1 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Morganella morganii S2
2 group_1307 NLDBIP_14280 128546 129046 -1 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Morganella morganii S4
3 group_1307 LHKJJB_08570 30703 31203 1 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Morganella morganii S3
4 group_1307 HKOGLL_08120 30703 31203 1 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Morganella morganii S5
5 group_1307 F4V73_RS12980 209097 209579 1 folK 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase Morganella psychrotolerans
6 group_1307 PMI_RS00950 233537 234034 -1 folK 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase Proteus mirabilis HI4320