PF01118


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01118, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01118
Description Semialdehyde dehydrogenase, NAD binding domain

Occurence in the database

PF01118 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1746 FBDBKF_12170 90341 91351 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S1
1 group_1917 FBDBKF_14270 53232 54242 -1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S1
2 group_2077 FBDBKF_15540 34500 35609 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S1
3 group_1917 EHELCC_08010 62743 63753 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S2
4 group_1746 EHELCC_14135 43354 44364 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S2
5 group_2077 EHELCC_15900 33800 34909 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S2
6 group_1917 NLDBIP_08335 62743 63753 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S4
7 group_1746 NLDBIP_15230 47291 48301 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S4
8 group_2077 NLDBIP_16470 45754 46863 -1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S4
9 group_1917 LHKJJB_05930 193406 194416 -1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S3
10 group_1746 LHKJJB_15380 90341 91351 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S3
11 group_2077 LHKJJB_16335 33800 34909 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S3
12 group_1917 HKOGLL_04985 47334 48344 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S5
13 group_1746 HKOGLL_14500 77004 78014 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S5
14 group_2077 HKOGLL_16105 33800 34909 1 asd aspartate-semialdehyde dehydrogenase Morganella morganii S5
15 group_1917 F4V73_RS02640 556258 557268 1 aspartate-semialdehyde dehydrogenase Morganella psychrotolerans
16 group_1746 F4V73_RS16980 18041 19051 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella psychrotolerans
17 group_2077 F4V73_RS17610 160427 161536 -1 asd aspartate-semialdehyde dehydrogenase Morganella psychrotolerans
18 group_1917 PMI_RS08780 1919840 1920850 -1 aspartate-semialdehyde dehydrogenase Proteus mirabilis HI4320
19 group_2077 PMI_RS15520 3451943 3453049 -1 asd aspartate-semialdehyde dehydrogenase Proteus mirabilis HI4320
20 group_1746 PMI_RS16005 3556948 3557952 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Proteus mirabilis HI4320