Orthogroup:group_1786



Homologs in group_1786

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13025 FBDBKF_13025 Morganella morganii S1 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
EHELCC_06340 EHELCC_06340 Morganella morganii S2 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
NLDBIP_06660 NLDBIP_06660 Morganella morganii S4 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
LHKJJB_03540 LHKJJB_03540 Morganella morganii S3 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
HKOGLL_07015 HKOGLL_07015 Morganella morganii S5 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
F4V73_RS16210 F4V73_RS16210 Morganella psychrotolerans ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
PMI_RS10725 PMI_RS10725 Proteus mirabilis HI4320 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK

Distribution of group_1786 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1786 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1786

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1786.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybaK 7

Product

# Product Occurence
1 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2606 7 J Translation, ribosomal structure and biogenesis (J) Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03976 7 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04073 7 Aminoacyl-tRNA editing domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 4
Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase EbsC 1
Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI 1
Uncharacterized protein YwhH 1

Protein length

Unique protein length 159

Protein length distribution