PF01106


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01106, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01106
Description NifU-like domain

Occurence in the database

PF01106 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1623 FBDBKF_10700 107675 108253 -1 nfuA NfuA family Fe-S biogenesis protein Morganella morganii S1
1 group_1623 EHELCC_15035 107665 108243 -1 nfuA NfuA family Fe-S biogenesis protein Morganella morganii S2
2 group_1623 NLDBIP_14865 107665 108243 -1 nfuA NfuA family Fe-S biogenesis protein Morganella morganii S4
3 group_1623 LHKJJB_14480 33483 34061 1 nfuA NfuA family Fe-S biogenesis protein Morganella morganii S3
4 group_1623 HKOGLL_13100 33483 34061 1 nfuA NfuA family Fe-S biogenesis protein Morganella morganii S5
5 group_1623 F4V73_RS14415 111031 111609 -1 nfuA Fe-S biogenesis protein NfuA Morganella psychrotolerans
6 group_1623 PMI_RS14465 3208647 3209225 1 nfuA Fe-S biogenesis protein NfuA Proteus mirabilis HI4320