PF00977
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00977, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 14 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF00977 |
Description |
Histidine biosynthesis protein |
Occurence in the database
PF00977 is associated with 14 different proteins (see tab "Protein list" and "Profile") |
The 14 proteins are classified into 2 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1194 |
FBDBKF_06900 |
45226 |
46005 |
-1 |
hisF |
Imidazole glycerol phosphate synthase subunit HisF |
Morganella morganii S1 |
1 |
group_1195 |
FBDBKF_06905 |
45987 |
46724 |
-1 |
hisA |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase |
Morganella morganii S1 |
2 |
group_1195 |
EHELCC_04065 |
139462 |
140199 |
1 |
hisA |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase |
Morganella morganii S2 |
3 |
group_1194 |
EHELCC_04070 |
140181 |
140960 |
1 |
hisF |
Imidazole glycerol phosphate synthase subunit HisF |
Morganella morganii S2 |
4 |
group_1195 |
NLDBIP_04065 |
139258 |
139995 |
1 |
hisA |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase |
Morganella morganii S4 |
5 |
group_1194 |
NLDBIP_04070 |
139977 |
140756 |
1 |
hisF |
Imidazole glycerol phosphate synthase subunit HisF |
Morganella morganii S4 |
6 |
group_1195 |
LHKJJB_09895 |
139372 |
140109 |
1 |
hisA |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase |
Morganella morganii S3 |
7 |
group_1194 |
LHKJJB_09900 |
140091 |
140870 |
1 |
hisF |
Imidazole glycerol phosphate synthase subunit HisF |
Morganella morganii S3 |
8 |
group_1194 |
HKOGLL_09075 |
50182 |
50961 |
-1 |
hisF |
Imidazole glycerol phosphate synthase subunit HisF |
Morganella morganii S5 |
9 |
group_1195 |
HKOGLL_09080 |
50943 |
51680 |
-1 |
hisA |
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase |
Morganella morganii S5 |
10 |
group_1194 |
F4V73_RS01085 |
230154 |
230936 |
-1 |
hisF |
imidazole glycerol phosphate synthase subunit HisF |
Morganella psychrotolerans |
11 |
group_1195 |
F4V73_RS01090 |
230918 |
231655 |
-1 |
hisA |
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase |
Morganella psychrotolerans |
12 |
group_1194 |
PMI_RS03245 |
717654 |
718427 |
-1 |
hisF |
imidazole glycerol phosphate synthase subunit HisF |
Proteus mirabilis HI4320 |
13 |
group_1195 |
PMI_RS03250 |
718409 |
719146 |
-1 |
hisA |
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase |
Proteus mirabilis HI4320 |