PF00977


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00977, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00977
Description Histidine biosynthesis protein

Occurence in the database

PF00977 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1194 FBDBKF_06900 45226 46005 -1 hisF Imidazole glycerol phosphate synthase subunit HisF Morganella morganii S1
1 group_1195 FBDBKF_06905 45987 46724 -1 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase Morganella morganii S1
2 group_1195 EHELCC_04065 139462 140199 1 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase Morganella morganii S2
3 group_1194 EHELCC_04070 140181 140960 1 hisF Imidazole glycerol phosphate synthase subunit HisF Morganella morganii S2
4 group_1195 NLDBIP_04065 139258 139995 1 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase Morganella morganii S4
5 group_1194 NLDBIP_04070 139977 140756 1 hisF Imidazole glycerol phosphate synthase subunit HisF Morganella morganii S4
6 group_1195 LHKJJB_09895 139372 140109 1 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase Morganella morganii S3
7 group_1194 LHKJJB_09900 140091 140870 1 hisF Imidazole glycerol phosphate synthase subunit HisF Morganella morganii S3
8 group_1194 HKOGLL_09075 50182 50961 -1 hisF Imidazole glycerol phosphate synthase subunit HisF Morganella morganii S5
9 group_1195 HKOGLL_09080 50943 51680 -1 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase Morganella morganii S5
10 group_1194 F4V73_RS01085 230154 230936 -1 hisF imidazole glycerol phosphate synthase subunit HisF Morganella psychrotolerans
11 group_1195 F4V73_RS01090 230918 231655 -1 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase Morganella psychrotolerans
12 group_1194 PMI_RS03245 717654 718427 -1 hisF imidazole glycerol phosphate synthase subunit HisF Proteus mirabilis HI4320
13 group_1195 PMI_RS03250 718409 719146 -1 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase Proteus mirabilis HI4320