PF00793


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00793, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00793
Description DAHP synthetase I family

Occurence in the database

PF00793 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_614 FBDBKF_01940 75245 76096 1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella morganii S1
1 group_10 FBDBKF_05860 178591 179640 1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S1
2 group_10 FBDBKF_09695 38107 39159 -1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella morganii S1
3 group_10 FBDBKF_15325 72741 73835 1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S1
4 group_614 EHELCC_02410 463065 463916 1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella morganii S2
5 group_10 EHELCC_04495 230072 231124 -1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella morganii S2
6 group_10 EHELCC_10920 11071 12165 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S2
7 group_10 EHELCC_11730 1854 2903 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S2
8 group_614 NLDBIP_01050 216220 217071 -1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella morganii S4
9 group_10 NLDBIP_04495 229868 230920 -1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella morganii S4
10 group_10 NLDBIP_11265 11071 12165 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S4
11 group_10 NLDBIP_12070 1809 2858 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S4
12 group_614 LHKJJB_00985 175614 176465 1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella morganii S3
13 group_10 LHKJJB_11125 11071 12165 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S3
14 group_10 LHKJJB_11930 1854 2903 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S3
15 group_10 LHKJJB_14135 104458 105510 1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella morganii S3
16 group_614 HKOGLL_01025 181125 181976 1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella morganii S5
17 group_10 HKOGLL_09735 11071 12165 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S5
18 group_10 HKOGLL_10545 1854 2903 -1 aroG1 3-deoxy-7-phosphoheptulonate synthase Morganella morganii S5
19 group_10 HKOGLL_12400 38888 39940 -1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella morganii S5
20 group_10 F4V73_RS00645 133697 134749 1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Morganella psychrotolerans
21 group_10 F4V73_RS03465 737543 738592 -1 3-deoxy-7-phosphoheptulonate synthase Morganella psychrotolerans
22 group_614 F4V73_RS04285 905575 906429 1 kdsA 3-deoxy-8-phosphooctulonate synthase Morganella psychrotolerans
23 group_10 F4V73_RS12125 10285 11379 -1 3-deoxy-7-phosphoheptulonate synthase Morganella psychrotolerans
24 group_10 PMI_RS01880 440479 441573 1 3-deoxy-7-phosphoheptulonate synthase Proteus mirabilis HI4320
25 group_10 PMI_RS02905 635781 636839 1 aroG 3-deoxy-7-phosphoheptulonate synthase AroG Proteus mirabilis HI4320
26 group_614 PMI_RS05280 1153327 1154181 1 kdsA 3-deoxy-8-phosphooctulonate synthase Proteus mirabilis HI4320
27 group_10 PMI_RS06885 1505772 1506821 1 3-deoxy-7-phosphoheptulonate synthase Proteus mirabilis HI4320