PF00590


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00590, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 39 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00590
Description Tetrapyrrole (Corrin/Porphyrin) Methylases

Occurence in the database

PF00590 is associated with 39 different proteins (see tab "Protein list" and "Profile")
The 39 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_706 FBDBKF_03060 11203 12075 -1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S1
1 group_296 FBDBKF_07445 441 1226 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S1
2 group_3082 FBDBKF_18860 17140 17865 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S1
3 group_3085 FBDBKF_18875 19460 20185 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S1
4 group_3087 FBDBKF_18885 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S1
5 group_3089 FBDBKF_18895 22562 23173 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S1
6 group_706 EHELCC_07475 235028 235900 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S2
7 group_3082 EHELCC_17055 17141 17866 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S2
8 group_3085 EHELCC_17070 19461 20186 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S2
9 group_3087 EHELCC_17080 21222 22001 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S2
10 group_3089 EHELCC_17090 22563 23174 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S2
11 group_296 EHELCC_17115 28091 28876 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S2
12 group_706 NLDBIP_07800 234901 235773 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S4
13 group_3082 NLDBIP_18435 17140 17865 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S4
14 group_3085 NLDBIP_18450 19460 20185 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S4
15 group_3087 NLDBIP_18460 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S4
16 group_3089 NLDBIP_18470 22562 23173 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S4
17 group_296 NLDBIP_18495 28090 28875 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S4
18 group_706 LHKJJB_07335 198647 199519 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S3
19 group_296 LHKJJB_09130 163454 164239 -1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S3
20 group_3089 LHKJJB_09155 169156 169767 1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S3
21 group_3087 LHKJJB_09165 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S3
22 group_3085 LHKJJB_09175 172144 172869 1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S3
23 group_3082 LHKJJB_09190 174464 175189 1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S3
24 group_706 HKOGLL_03595 33868 34740 -1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S5
25 group_296 HKOGLL_08680 163454 164239 -1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S5
26 group_3089 HKOGLL_08705 169156 169767 1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S5
27 group_3087 HKOGLL_08715 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S5
28 group_3085 HKOGLL_08725 172144 172869 1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S5
29 group_3082 HKOGLL_08740 174464 175189 1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S5
30 group_706 F4V73_RS11860 527217 528089 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella psychrotolerans
31 group_296 F4V73_RS13675 370979 371764 -1 cobA uroporphyrinogen-III C-methyltransferase Morganella psychrotolerans
32 group_3089 F4V73_RS13700 376697 377311 1 cobalt-precorrin-7 (C(5))-methyltransferase Morganella psychrotolerans
33 group_3087 F4V73_RS13710 377873 378652 1 cobalt-precorrin-4 methyltransferase Morganella psychrotolerans
34 group_3085 F4V73_RS13720 379688 380413 1 precorrin-3B C(17)-methyltransferase Morganella psychrotolerans
35 group_3082 F4V73_RS13735 382012 382737 1 cobalt-factor II C(20)-methyltransferase Morganella psychrotolerans
36 group_296 PMI_RS07150 1562831 1564213 -1 cysG siroheme synthase CysG Proteus mirabilis HI4320
37 group_296 PMI_RS11070 2435616 2437037 -1 cysG siroheme synthase CysG Proteus mirabilis HI4320
38 group_706 PMI_RS18375 4032526 4033404 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Proteus mirabilis HI4320