PF00590

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00590
Protein list: lists the 39 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00590
Description Tetrapyrrole (Corrin/Porphyrin) Methylases

Occurence in the database

PF00590 is associated with 39 different proteins
The 39 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_777 FBDBKF_03060 11203 12075 -1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S1
1 group_269 FBDBKF_07445 441 1226 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S1
2 group_3082 FBDBKF_18860 17140 17865 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S1
3 group_3085 FBDBKF_18875 19460 20185 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S1
4 group_3087 FBDBKF_18885 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S1
5 group_3089 FBDBKF_18895 22562 23173 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S1
6 group_777 EHELCC_07475 235028 235900 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S2
7 group_3082 EHELCC_17055 17141 17866 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S2
8 group_3085 EHELCC_17070 19461 20186 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S2
9 group_3087 EHELCC_17080 21222 22001 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S2
10 group_3089 EHELCC_17090 22563 23174 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S2
11 group_269 EHELCC_17115 28091 28876 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S2
12 group_777 NLDBIP_07800 234901 235773 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S4
13 group_3082 NLDBIP_18435 17140 17865 -1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S4
14 group_3085 NLDBIP_18450 19460 20185 -1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S4
15 group_3087 NLDBIP_18460 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S4
16 group_3089 NLDBIP_18470 22562 23173 -1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S4
17 group_269 NLDBIP_18495 28090 28875 1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S4
18 group_777 LHKJJB_07335 198647 199519 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S3
19 group_269 LHKJJB_09130 163454 164239 -1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S3
20 group_3089 LHKJJB_09155 169156 169767 1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S3
21 group_3087 LHKJJB_09165 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S3
22 group_3085 LHKJJB_09175 172144 172869 1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S3
23 group_3082 LHKJJB_09190 174464 175189 1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S3
24 group_777 HKOGLL_03595 33868 34740 -1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella morganii S5
25 group_269 HKOGLL_08680 163454 164239 -1 cobA Uroporphyrinogen-III methylase (siroheme synthase) Morganella morganii S5
26 group_3089 HKOGLL_08705 169156 169767 1 cbiE cobalt-precorrin-7 (C(5))-methyltransferase Morganella morganii S5
27 group_3087 HKOGLL_08715 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S5
28 group_3085 HKOGLL_08725 172144 172869 1 cbiE precorrin-3B C(17)-methyltransferase Morganella morganii S5
29 group_3082 HKOGLL_08740 174464 175189 1 cobI cobalt-factor II C(20)-methyltransferase Morganella morganii S5
30 group_777 F4V73_RS11860 527217 528089 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Morganella psychrotolerans
31 group_269 F4V73_RS13675 370979 371764 -1 cobA uroporphyrinogen-III C-methyltransferase Morganella psychrotolerans
32 group_3089 F4V73_RS13700 376697 377311 1 cobalt-precorrin-7 (C(5))-methyltransferase Morganella psychrotolerans
33 group_3087 F4V73_RS13710 377873 378652 1 cobalt-precorrin-4 methyltransferase Morganella psychrotolerans
34 group_3085 F4V73_RS13720 379688 380413 1 precorrin-3B C(17)-methyltransferase Morganella psychrotolerans
35 group_3082 F4V73_RS13735 382012 382737 1 cobalt-factor II C(20)-methyltransferase Morganella psychrotolerans
36 group_269 PMI_RS07150 1562831 1564213 -1 cysG siroheme synthase CysG Proteus mirabilis HI4320
37 group_269 PMI_RS11070 2435616 2437037 -1 cysG siroheme synthase CysG Proteus mirabilis HI4320
38 group_777 PMI_RS18375 4032526 4033404 1 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Proteus mirabilis HI4320