PF00449


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00449, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00449
Description Urease alpha-subunit, N-terminal domain

Occurence in the database

PF00449 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1160 FBDBKF_06655 171283 173001 -1 ureC urease subunit alpha Morganella morganii S1
1 group_1160 EHELCC_09700 171855 173573 -1 ureC urease subunit alpha Morganella morganii S2
2 group_1160 NLDBIP_10080 171855 173573 -1 ureC urease subunit alpha Morganella morganii S4
3 group_1160 LHKJJB_07670 43665 45383 1 ureC urease subunit alpha Morganella morganii S3
4 group_1160 HKOGLL_07220 43665 45383 1 ureC urease subunit alpha Morganella morganii S5
5 group_1160 F4V73_RS15280 41279 42997 1 urease subunit alpha Morganella psychrotolerans
6 group_1160 PMI_RS18335 4025375 4027078 1 ureC urease subunit alpha Proteus mirabilis HI4320