PF00375
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00375
Protein list: lists the 20 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link |
PF00375 |
Description |
Sodium:dicarboxylate symporter family |
Occurence in the database
PF00375 is associated with 20 different
proteins
|
The 20 proteins are classified into 3 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_87 |
FBDBKF_07495 |
11823 |
13118 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S1 |
1 |
group_1858 |
FBDBKF_13485 |
74689 |
76083 |
1 |
tcyP |
L-cystine transporter TcyP, sodium:dicarboxylate symporter family |
Morganella morganii S1 |
2 |
group_87 |
FBDBKF_18790 |
4115 |
5413 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S1 |
3 |
group_1858 |
EHELCC_08610 |
199108 |
200502 |
-1 |
tcyP |
L-cystine transporter TcyP, sodium:dicarboxylate symporter family |
Morganella morganii S2 |
4 |
group_87 |
EHELCC_16985 |
4116 |
5414 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S2 |
5 |
group_87 |
EHELCC_17165 |
39473 |
40768 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S2 |
6 |
group_1858 |
NLDBIP_08935 |
199108 |
200502 |
-1 |
tcyP |
L-cystine transporter TcyP, sodium:dicarboxylate symporter family |
Morganella morganii S4 |
7 |
group_87 |
NLDBIP_13770 |
6892 |
8187 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S4 |
8 |
group_87 |
NLDBIP_18365 |
4115 |
5413 |
1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S4 |
9 |
group_1858 |
LHKJJB_05330 |
56657 |
58051 |
1 |
tcyP |
L-cystine transporter TcyP, sodium:dicarboxylate symporter family |
Morganella morganii S3 |
10 |
group_87 |
LHKJJB_09080 |
151562 |
152857 |
-1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S3 |
11 |
group_87 |
LHKJJB_09260 |
186916 |
188214 |
-1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S3 |
12 |
group_1858 |
HKOGLL_05585 |
183699 |
185093 |
-1 |
tcyP |
L-cystine transporter TcyP, sodium:dicarboxylate symporter family |
Morganella morganii S5 |
13 |
group_87 |
HKOGLL_08630 |
151562 |
152857 |
-1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S5 |
14 |
group_87 |
HKOGLL_08810 |
186916 |
188214 |
-1 |
gltP |
Na+/H+-dicarboxylate symporter |
Morganella morganii S5 |
15 |
group_1858 |
F4V73_RS03280 |
699687 |
701081 |
-1 |
|
L-cystine transporter |
Morganella psychrotolerans |
16 |
group_87 |
F4V73_RS13620 |
358734 |
360026 |
-1 |
|
dicarboxylate/amino acid:cation symporter |
Morganella psychrotolerans |
17 |
group_87 |
F4V73_RS13805 |
394654 |
395967 |
-1 |
|
dicarboxylate/amino acid:cation symporter |
Morganella psychrotolerans |
18 |
group_1858 |
PMI_RS04950 |
1084435 |
1085826 |
-1 |
|
L-cystine transporter |
Proteus mirabilis HI4320 |
19 |
group_4478 |
PMI_RS18415 |
4038945 |
4040198 |
1 |
sstT |
serine/threonine transporter SstT |
Proteus mirabilis HI4320 |