PF00375


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00375
Protein list: lists the 20 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00375
Description Sodium:dicarboxylate symporter family

Occurence in the database

PF00375 is associated with 20 different proteins
The 20 proteins are classified into 3 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_87 FBDBKF_07495 11823 13118 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S1
1 group_1858 FBDBKF_13485 74689 76083 1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family Morganella morganii S1
2 group_87 FBDBKF_18790 4115 5413 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S1
3 group_1858 EHELCC_08610 199108 200502 -1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family Morganella morganii S2
4 group_87 EHELCC_16985 4116 5414 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S2
5 group_87 EHELCC_17165 39473 40768 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S2
6 group_1858 NLDBIP_08935 199108 200502 -1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family Morganella morganii S4
7 group_87 NLDBIP_13770 6892 8187 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S4
8 group_87 NLDBIP_18365 4115 5413 1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S4
9 group_1858 LHKJJB_05330 56657 58051 1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family Morganella morganii S3
10 group_87 LHKJJB_09080 151562 152857 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S3
11 group_87 LHKJJB_09260 186916 188214 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S3
12 group_1858 HKOGLL_05585 183699 185093 -1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family Morganella morganii S5
13 group_87 HKOGLL_08630 151562 152857 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S5
14 group_87 HKOGLL_08810 186916 188214 -1 gltP Na+/H+-dicarboxylate symporter Morganella morganii S5
15 group_1858 F4V73_RS03280 699687 701081 -1 L-cystine transporter Morganella psychrotolerans
16 group_87 F4V73_RS13620 358734 360026 -1 dicarboxylate/amino acid:cation symporter Morganella psychrotolerans
17 group_87 F4V73_RS13805 394654 395967 -1 dicarboxylate/amino acid:cation symporter Morganella psychrotolerans
18 group_1858 PMI_RS04950 1084435 1085826 -1 L-cystine transporter Proteus mirabilis HI4320
19 group_4478 PMI_RS18415 4038945 4040198 1 sstT serine/threonine transporter SstT Proteus mirabilis HI4320