Orthogroup:group_1858


Homologs in group_1858

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13890 FBDBKF_13890 Morganella morganii S1 citE Citrate lyase beta subunit
EHELCC_11560 EHELCC_11560 Morganella morganii S2 citE Citrate lyase beta subunit
NLDBIP_11905 NLDBIP_11905 Morganella morganii S4 citE Citrate lyase beta subunit
LHKJJB_11765 LHKJJB_11765 Morganella morganii S3 citE Citrate lyase beta subunit
HKOGLL_10375 HKOGLL_10375 Morganella morganii S5 citE Citrate lyase beta subunit
F4V73_RS12755 F4V73_RS12755 Morganella psychrotolerans - HpcH/HpaI aldolase/citrate lyase family protein
PMI_RS11835 PMI_RS11835 Proteus mirabilis HI4320 - HpcH/HpaI aldolase/citrate lyase family protein

Distribution of group_1858 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1858 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1858

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1858.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 citE 5
2 - 2

Product

# Product Occurence
1 Citrate lyase beta subunit 5
2 HpcH/HpaI aldolase/citrate lyase family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2301 7 G Carbohydrate transport and metabolism (G) Citrate lyase beta subunit

Pfam domain Annotation(s)

Domain ID Occurences Description
PF15617 7 C-C_Bond_Lyase of the TIM-Barrel fold

Protein length

Min length 314
Max length 315
Mean length (sd) 314.9 (0.4)
Median length 315.0

Protein length distribution