PF00330


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00330, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00330
Description Aconitase family (aconitate hydratase)

Occurence in the database

PF00330 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_837 FBDBKF_04220 27957 30554 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella morganii S1
1 group_871 FBDBKF_04420 77363 78775 1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit Morganella morganii S1
2 group_939 FBDBKF_05100 24531 27203 -1 acnA aconitate hydratase AcnA Morganella morganii S1
3 group_837 EHELCC_05510 87414 90011 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella morganii S2
4 group_871 EHELCC_05710 136820 138232 1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit Morganella morganii S2
5 group_939 EHELCC_12490 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S2
6 group_837 NLDBIP_05830 128479 131076 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella morganii S4
7 group_871 NLDBIP_06030 177885 179297 1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit Morganella morganii S4
8 group_939 NLDBIP_12830 154246 156918 1 acnA aconitate hydratase AcnA Morganella morganii S4
9 group_837 LHKJJB_02710 106003 108600 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella morganii S3
10 group_871 LHKJJB_02910 155409 156821 1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit Morganella morganii S3
11 group_939 LHKJJB_12690 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S3
12 group_837 HKOGLL_06185 27867 30464 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella morganii S5
13 group_871 HKOGLL_06385 77273 78685 1 leuC Homoaconitase/3-isopropylmalate dehydratase large subunit Morganella morganii S5
14 group_939 HKOGLL_11305 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S5
15 group_939 F4V73_RS05555 1179598 1182264 -1 acnA aconitate hydratase AcnA Morganella psychrotolerans
16 group_837 F4V73_RS08670 1789011 1791608 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Morganella psychrotolerans
17 group_871 F4V73_RS08865 1838494 1839906 1 leuC 3-isopropylmalate dehydratase large subunit Morganella psychrotolerans
18 group_939 PMI_RS06370 1395199 1397871 -1 acnA aconitate hydratase AcnA Proteus mirabilis HI4320
19 group_837 PMI_RS10060 2181232 2183829 -1 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Proteus mirabilis HI4320
20 group_871 PMI_RS10275 2253054 2254463 1 leuC 3-isopropylmalate dehydratase large subunit Proteus mirabilis HI4320