PF00206


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00206, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 36 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00206
Description Lyase

Occurence in the database

PF00206 is associated with 36 different proteins (see tab "Protein list" and "Profile")
The 36 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_254 FBDBKF_03785 159935 161305 -1 purB Adenylosuccinate lyase Morganella morganii S1
1 group_808 FBDBKF_03815 167109 168533 1 aspA aspartate ammonia-lyase Morganella morganii S1
2 group_920 FBDBKF_04990 1882 3276 -1 fumC class II fumarate hydratase Morganella morganii S1
3 group_1743 FBDBKF_12155 86775 88154 -1 argH argininosuccinate lyase Morganella morganii S1
4 group_1942 FBDBKF_14570 8072 9439 1 purB adenylosuccinate lyase Morganella morganii S1
5 group_808 EHELCC_06720 78570 79994 -1 aspA aspartate ammonia-lyase Morganella morganii S2
6 group_254 EHELCC_06750 85798 87168 1 purB Adenylosuccinate lyase Morganella morganii S2
7 group_920 EHELCC_12600 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S2
8 group_1743 EHELCC_14150 46551 47930 1 argH argininosuccinate lyase Morganella morganii S2
9 group_1942 EHELCC_15375 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S2
10 group_808 NLDBIP_07045 78443 79867 -1 aspA aspartate ammonia-lyase Morganella morganii S4
11 group_254 NLDBIP_07075 85671 87041 1 purB Adenylosuccinate lyase Morganella morganii S4
12 group_920 NLDBIP_12940 178173 179567 1 fumC class II fumarate hydratase Morganella morganii S4
13 group_1743 NLDBIP_15245 50488 51867 1 argH argininosuccinate lyase Morganella morganii S4
14 group_1942 NLDBIP_15905 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S4
15 group_808 LHKJJB_06580 42189 43613 -1 aspA aspartate ammonia-lyase Morganella morganii S3
16 group_254 LHKJJB_06610 49417 50787 1 purB Adenylosuccinate lyase Morganella morganii S3
17 group_920 LHKJJB_12800 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S3
18 group_1743 LHKJJB_15365 86775 88154 -1 argH argininosuccinate lyase Morganella morganii S3
19 group_1942 LHKJJB_15935 77171 78538 -1 purB adenylosuccinate lyase Morganella morganii S3
20 group_254 HKOGLL_04320 182600 183970 -1 purB Adenylosuccinate lyase Morganella morganii S5
21 group_808 HKOGLL_04350 189774 191198 1 aspA aspartate ammonia-lyase Morganella morganii S5
22 group_920 HKOGLL_11415 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S5
23 group_1743 HKOGLL_14485 73438 74817 -1 argH argininosuccinate lyase Morganella morganii S5
24 group_1942 HKOGLL_15055 76383 77750 -1 purB adenylosuccinate lyase Morganella morganii S5
25 group_920 F4V73_RS05435 1154543 1155937 -1 fumC class II fumarate hydratase Morganella psychrotolerans
26 group_1942 F4V73_RS07365 1536308 1537675 1 purB adenylosuccinate lyase Morganella psychrotolerans
27 group_808 F4V73_RS11055 347901 349325 -1 aspA aspartate ammonia-lyase Morganella psychrotolerans
28 group_254 F4V73_RS11085 355260 356630 1 adenylosuccinate lyase family protein Morganella psychrotolerans
29 group_1743 F4V73_RS16965 14398 15777 -1 argH argininosuccinate lyase Morganella psychrotolerans
30 group_254 PMI_RS03090 680327 681694 1 purB adenylosuccinate lyase Proteus mirabilis HI4320
31 group_1942 PMI_RS04355 978518 979888 -1 purB adenylosuccinate lyase Proteus mirabilis HI4320
32 group_920 PMI_RS06255 1369935 1371332 -1 fumC class II fumarate hydratase Proteus mirabilis HI4320
33 group_808 PMI_RS12590 2789722 2791146 1 aspA aspartate ammonia-lyase Proteus mirabilis HI4320
34 group_254 PMI_RS14740 3269739 3271109 -1 adenylosuccinate lyase family protein Proteus mirabilis HI4320
35 group_1743 PMI_RS16020 3560115 3561497 1 argH argininosuccinate lyase Proteus mirabilis HI4320