K25182
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K25182, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs
within the database. 7 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.
Description
External link |
K25182 |
KO |
K25182 |
Description |
drug efflux transport system ATP-binding protein |
KO part of 0 pathways
KO part of 0 modules
Occurence in the database
K25182 is associated with 7 different proteins (see tab "Protein list" and "Profile") |
The 7 proteins are classified into 1 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1479 |
PMI_RS03040 |
669331 |
671100 |
-1 |
|
ATP-binding cassette domain-containing protein |
Proteus mirabilis HI4320 |
1 |
group_1479 |
FBDBKF_09550 |
8095 |
9840 |
1 |
lptB |
LPS export ABC transporter ATP-binding protein |
Morganella morganii S1 |
2 |
group_1479 |
EHELCC_04350 |
200060 |
201805 |
1 |
lptB |
LPS export ABC transporter ATP-binding protein |
Morganella morganii S2 |
3 |
group_1479 |
NLDBIP_04350 |
199856 |
201601 |
1 |
lptB |
LPS export ABC transporter ATP-binding protein |
Morganella morganii S4 |
4 |
group_1479 |
LHKJJB_14280 |
133777 |
135522 |
-1 |
lptB |
LPS export ABC transporter ATP-binding protein |
Morganella morganii S3 |
5 |
group_1479 |
HKOGLL_12255 |
8876 |
10621 |
1 |
lptB |
LPS export ABC transporter ATP-binding protein |
Morganella morganii S5 |
6 |
group_1479 |
F4V73_RS00815 |
168310 |
170055 |
-1 |
|
ATP-binding cassette domain-containing protein |
Morganella psychrotolerans |