K21470


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K21470, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K21470
KO K21470
Description L,D-transpeptidase YcbB

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K21470 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1244 PMI_RS03590 804395 806110 1 ldtD L,D-transpeptidase Proteus mirabilis HI4320
1 group_1244 FBDBKF_07235 123932 125665 1 ldtD L,D-transpeptidase Morganella morganii S1
2 group_1244 EHELCC_03735 60521 62254 -1 ldtD L,D-transpeptidase Morganella morganii S2
3 group_1244 NLDBIP_03735 60317 62050 -1 ldtD L,D-transpeptidase Morganella morganii S4
4 group_1244 LHKJJB_09565 60431 62164 -1 ldtD L,D-transpeptidase Morganella morganii S3
5 group_1244 HKOGLL_09410 128888 130621 1 ldtD L,D-transpeptidase Morganella morganii S5
6 group_1244 F4V73_RS01420 311910 313664 1 ldtD L,D-transpeptidase Morganella psychrotolerans