K21470


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K21470
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K21470
KO K21470
Description L,D-transpeptidase YcbB

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K21470 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1302 FBDBKF_07235 123932 125665 1 ldtD L,D-transpeptidase Morganella morganii S1
1 group_1302 EHELCC_03735 60521 62254 -1 ldtD L,D-transpeptidase Morganella morganii S2
2 group_1302 NLDBIP_03735 60317 62050 -1 ldtD L,D-transpeptidase Morganella morganii S4
3 group_1302 LHKJJB_09565 60431 62164 -1 ldtD L,D-transpeptidase Morganella morganii S3
4 group_1302 HKOGLL_09410 128888 130621 1 ldtD L,D-transpeptidase Morganella morganii S5
5 group_1302 F4V73_RS01420 311910 313664 1 ldtD L,D-transpeptidase Morganella psychrotolerans
6 group_1302 PMI_RS03590 804395 806110 1 ldtD L,D-transpeptidase Proteus mirabilis HI4320