K18954


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K18954, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K18954
KO K18954
Description AraC family transcriptional regulator, transcriptional activator of pobA

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K18954 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2704 PMI_RS06035 1322515 1323360 1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
1 group_2704 FBDBKF_06570 153541 154398 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
2 group_2704 EHELCC_09615 154113 154970 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
3 group_2704 NLDBIP_09995 154113 154970 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
4 group_2704 LHKJJB_07760 62268 63125 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
5 group_2704 HKOGLL_07310 62268 63125 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5