K18148


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K18148, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K18148
KO K18148
Description release factor H-coupled RctB family protein

KO part of 1 pathways

beta-Lactam resistance

KO part of 0 modules

Occurence in the database

K18148 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2981 PMI_RS17450 3830079 3831215 -1 RNA ligase RtcB family protein Proteus mirabilis HI4320
1 group_2981 FBDBKF_16965 20698 21834 1 rtcB RNA ligase RtcB family protein Morganella morganii S1
2 group_2981 EHELCC_16625 46676 47812 -1 rtcB RNA ligase RtcB family protein Morganella morganii S2
3 group_2981 NLDBIP_16835 46676 47812 -1 rtcB RNA ligase RtcB family protein Morganella morganii S4
4 group_2981 LHKJJB_16635 20698 21834 1 rtcB RNA ligase RtcB family protein Morganella morganii S3
5 group_2981 HKOGLL_17600 20698 21834 1 rtcB RNA ligase RtcB family protein Morganella morganii S5