Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K16089
Protein list: lists the 14 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
KO part of 0 pathways
KO part of 0 modules
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_479 | FBDBKF_11085 | 40637 | 42676 | 1 | TonB-dependent receptor | Morganella morganii S1 | |
1 | group_479 | NLDBIP_05460 | 57857 | 59896 | -1 | TonB-dependent receptor | Morganella morganii S4 | |
2 | group_479 | LHKJJB_02340 | 35381 | 37420 | -1 | TonB-dependent receptor | Morganella morganii S3 | |
3 | group_479 | HKOGLL_15720 | 58821 | 60860 | -1 | TonB-dependent receptor | Morganella morganii S5 | |
4 | group_478 | FBDBKF_14795 | 58287 | 60251 | -1 | fepA | ligand-gated channel protein | Morganella morganii S1 |
5 | group_478 | EHELCC_15600 | 88363 | 90327 | -1 | fepA | ligand-gated channel protein | Morganella morganii S2 |
6 | group_478 | NLDBIP_16130 | 88363 | 90327 | -1 | fepA | ligand-gated channel protein | Morganella morganii S4 |
7 | group_478 | LHKJJB_15710 | 26359 | 28323 | 1 | fepA | ligand-gated channel protein | Morganella morganii S3 |
8 | group_478 | HKOGLL_14830 | 25571 | 27535 | 1 | fepA | ligand-gated channel protein | Morganella morganii S5 |
9 | group_478 | F4V73_RS07595 | 1587646 | 1589619 | -1 | ligand-gated channel protein | Morganella psychrotolerans | |
10 | group_479 | F4V73_RS08185 | 1701634 | 1703715 | -1 | TonB-dependent receptor | Morganella psychrotolerans | |
11 | group_478 | PMI_RS04135 | 924911 | 926893 | 1 | ligand-gated channel protein | Proteus mirabilis HI4320 | |
12 | group_479 | PMI_RS09585 | 2091575 | 2093614 | -1 | IreA family TonB-dependent siderophore receptor | Proteus mirabilis HI4320 | |
13 | group_479 | EHELCC_05140 | 16792 | 18831 | -1 | Colicin I receptor | Morganella morganii S2 |