K12960


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K12960, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K12960
KO K12960
Description 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]

KO part of 2 pathways

Cysteine and methionine metabolism
Metabolic pathways

KO part of 0 modules

Occurence in the database

K12960 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_679 PMI_RS06080 1332925 1334325 1 amidohydrolase Proteus mirabilis HI4320
1 group_679 FBDBKF_02570 212242 213639 -1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase Morganella morganii S1
2 group_679 EHELCC_03040 600062 601459 -1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase Morganella morganii S2
3 group_679 NLDBIP_00420 78677 80074 1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase Morganella morganii S4
4 group_679 LHKJJB_01615 312611 314008 -1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase Morganella morganii S3
5 group_679 HKOGLL_01655 318122 319519 -1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase Morganella morganii S5
6 group_679 F4V73_RS05000 1064977 1066377 -1 amidohydrolase Morganella psychrotolerans