K11531


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K11531
Protein list: lists the 6 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K11531
KO K11531
Description lsr operon transcriptional repressor

KO part of 2 pathways

Quorum sensing
Biofilm formation - Escherichia coli

KO part of 0 modules

Occurence in the database

K11531 is associated with 6 different proteins
The 6 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2551 FBDBKF_02195 128710 129633 1 lsrR transcriptional regulator LsrR Morganella morganii S1
1 group_2551 EHELCC_02665 516530 517453 1 lsrR transcriptional regulator LsrR Morganella morganii S2
2 group_2551 NLDBIP_00795 162683 163606 -1 lsrR transcriptional regulator LsrR Morganella morganii S4
3 group_2551 LHKJJB_01240 229079 230002 1 lsrR transcriptional regulator LsrR Morganella morganii S3
4 group_2551 HKOGLL_01280 234590 235513 1 lsrR transcriptional regulator LsrR Morganella morganii S5
5 group_2551 F4V73_RS04565 965357 966307 1 lsrR transcriptional regulator LsrR Morganella psychrotolerans