K11531


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K11531, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K11531
KO K11531
Description lsr operon transcriptional repressor

KO part of 2 pathways

Quorum sensing
Biofilm formation - Escherichia coli

KO part of 0 modules

Occurence in the database

K11531 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2521 FBDBKF_02195 128710 129633 1 lsrR transcriptional regulator LsrR Morganella morganii S1
1 group_2521 EHELCC_02665 516530 517453 1 lsrR transcriptional regulator LsrR Morganella morganii S2
2 group_2521 NLDBIP_00795 162683 163606 -1 lsrR transcriptional regulator LsrR Morganella morganii S4
3 group_2521 LHKJJB_01240 229079 230002 1 lsrR transcriptional regulator LsrR Morganella morganii S3
4 group_2521 HKOGLL_01280 234590 235513 1 lsrR transcriptional regulator LsrR Morganella morganii S5
5 group_2521 F4V73_RS04565 965357 966307 1 lsrR transcriptional regulator LsrR Morganella psychrotolerans