K10555


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10555, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10555
KO K10555
Description AI-2 transport system substrate-binding protein

KO part of 2 pathways

ABC transporters
Quorum sensing

KO part of 0 modules

Occurence in the database

K10555 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2517 FBDBKF_02175 123754 124770 -1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella morganii S1
1 group_2517 EHELCC_02645 511574 512590 -1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella morganii S2
2 group_2517 NLDBIP_00815 167546 168562 1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella morganii S4
3 group_2517 LHKJJB_01220 224123 225139 -1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella morganii S3
4 group_2517 HKOGLL_01260 229634 230650 -1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella morganii S5
5 group_2517 F4V73_RS04545 960415 961431 -1 lsrB autoinducer 2 ABC transporter substrate-binding protein LsrB Morganella psychrotolerans