K10439


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10439, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10439
KO K10439
Description ribose transport system substrate-binding protein

KO part of 2 pathways

ABC transporters
Bacterial chemotaxis

KO part of 0 modules

Occurence in the database

K10439 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_396 PMI_RS00430 116397 117287 -1 rbsB ribose ABC transporter substrate-binding protein RbsB Proteus mirabilis HI4320
1 group_396 FBDBKF_15400 5227 6117 -1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella morganii S1
2 group_396 EHELCC_15760 4527 5417 -1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella morganii S2
3 group_396 NLDBIP_16610 75246 76136 1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella morganii S4
4 group_396 LHKJJB_16195 4527 5417 -1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella morganii S3
5 group_396 HKOGLL_15965 4527 5417 -1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella morganii S5
6 group_396 F4V73_RS09115 1906365 1907291 -1 substrate-binding domain-containing protein Morganella psychrotolerans
7 group_396 F4V73_RS17745 190969 191859 1 rbsB ribose ABC transporter substrate-binding protein RbsB Morganella psychrotolerans