K06182


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K06182, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K06182
KO K06182
Description 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K06182 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2183 PMI_RS14195 3151719 3152597 -1 rluF 23S rRNA pseudouridine(2604) synthase RluF Proteus mirabilis HI4320
1 group_2183 FBDBKF_16440 11662 12558 1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella morganii S1
2 group_2183 EHELCC_08305 128648 129544 1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella morganii S2
3 group_2183 NLDBIP_08630 128648 129544 1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella morganii S4
4 group_2183 LHKJJB_05635 127615 128511 -1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella morganii S3
5 group_2183 HKOGLL_05280 113239 114135 1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella morganii S5
6 group_2183 F4V73_RS02960 627171 628064 1 rluF 23S rRNA pseudouridine(2604) synthase RluF Morganella psychrotolerans