K06178


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K06178, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K06178
KO K06178
Description 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K06178 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_944 PMI_RS06465 1418468 1419394 -1 rluB 23S rRNA pseudouridine(2605) synthase RluB Proteus mirabilis HI4320
1 group_944 FBDBKF_05140 35508 36440 -1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella morganii S1
2 group_944 EHELCC_12450 145054 145986 1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella morganii S2
3 group_944 NLDBIP_12790 145009 145941 1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella morganii S4
4 group_944 LHKJJB_12650 145054 145986 1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella morganii S3
5 group_944 HKOGLL_11265 145054 145986 1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella morganii S5
6 group_944 F4V73_RS05595 1190611 1191543 -1 rluB 23S rRNA pseudouridine(2605) synthase RluB Morganella psychrotolerans