K06176


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K06176, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K06176
KO K06176
Description tRNA pseudouridine13 synthase [EC:5.4.99.27]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K06176 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2352 PMI_RS11035 2429709 2430761 -1 truD tRNA pseudouridine(13) synthase TruD Proteus mirabilis HI4320
1 group_2352 FBDBKF_18990 15408 16454 -1 truD tRNA pseudouridine(13) synthase TruD Morganella morganii S1
2 group_2352 EHELCC_18735 15408 16454 -1 truD tRNA pseudouridine(13) synthase TruD Morganella morganii S2
3 group_2352 NLDBIP_18570 9059 10105 1 truD tRNA pseudouridine(13) synthase TruD Morganella morganii S4
4 group_2352 LHKJJB_18605 15408 16454 -1 truD tRNA pseudouridine(13) synthase TruD Morganella morganii S3
5 group_2352 HKOGLL_18340 15408 16454 -1 truD tRNA pseudouridine(13) synthase TruD Morganella morganii S5
6 group_2352 F4V73_RS13900 416977 418023 -1 truD tRNA pseudouridine(13) synthase TruD Morganella psychrotolerans