K05787


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05787, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05787
KO K05787
Description DNA-binding protein HU-alpha

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05787 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2303 PMI_RS13685 3041856 3042128 -1 HU family DNA-binding protein Proteus mirabilis HI4320
1 group_2303 FBDBKF_17695 34908 35180 1 hupA nucleoid-associated protein HU-alpha Morganella morganii S1
2 group_2303 EHELCC_18180 34284 34556 1 hupA nucleoid-associated protein HU-alpha Morganella morganii S2
3 group_2303 NLDBIP_17970 4181 4453 -1 hupA nucleoid-associated protein HU-alpha Morganella morganii S4
4 group_2303 LHKJJB_18165 4181 4453 -1 hupA nucleoid-associated protein HU-alpha Morganella morganii S3
5 group_2303 HKOGLL_18035 34284 34556 1 hupA nucleoid-associated protein HU-alpha Morganella morganii S5
6 group_2303 F4V73_RS15075 253598 253870 1 hupA nucleoid-associated protein HU-alpha Morganella psychrotolerans