K05785


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05785, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05785
KO K05785
Description transcriptional antiterminator RfaH

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05785 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2211 PMI_RS17605 3863089 3863589 -1 rfaH transcription/translation regulatory transformer protein RfaH Proteus mirabilis HI4320
1 group_2211 FBDBKF_16910 11109 11600 1 rfaH transcription/translation regulatory transformer protein RfaH Morganella morganii S1
2 group_2211 NLDBIP_16890 56910 57401 -1 rfaH transcription/translation regulatory transformer protein RfaH Morganella morganii S4
3 group_2211 LHKJJB_16580 11109 11600 1 rfaH transcription/translation regulatory transformer protein RfaH Morganella morganii S3
4 group_2211 HKOGLL_17545 11109 11600 1 rfaH transcription/translation regulatory transformer protein RfaH Morganella morganii S5
5 group_2211 F4V73_RS18380 11226 11717 1 rfaH transcription/translation regulatory transformer protein RfaH Morganella psychrotolerans