K05501


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05501, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05501
KO K05501
Description TetR/AcrR family transcriptional regulator

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05501 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2156 PMI_RS15590 3466656 3467261 -1 slmA nucleoid occlusion factor SlmA Proteus mirabilis HI4320
1 group_2156 FBDBKF_16225 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S1
2 group_2156 EHELCC_16260 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S2
3 group_2156 NLDBIP_17080 27196 27789 1 slmA nucleoid occlusion factor SlmA Morganella morganii S4
4 group_2156 LHKJJB_17000 30298 30891 1 slmA nucleoid occlusion factor SlmA Morganella morganii S3
5 group_2156 HKOGLL_16840 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S5
6 group_2156 F4V73_RS17375 105929 106522 1 slmA nucleoid occlusion factor SlmA Morganella psychrotolerans