Homologs in group_2156

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16225 FBDBKF_16225 84.3 Morganella morganii S1 slmA nucleoid occlusion factor SlmA
EHELCC_16260 EHELCC_16260 84.3 Morganella morganii S2 slmA nucleoid occlusion factor SlmA
NLDBIP_17080 NLDBIP_17080 84.3 Morganella morganii S4 slmA nucleoid occlusion factor SlmA
LHKJJB_17000 LHKJJB_17000 84.3 Morganella morganii S3 slmA nucleoid occlusion factor SlmA
HKOGLL_16840 HKOGLL_16840 84.3 Morganella morganii S5 slmA nucleoid occlusion factor SlmA
F4V73_RS17375 F4V73_RS17375 82.2 Morganella psychrotolerans slmA nucleoid occlusion factor SlmA

Distribution of the homologs in the orthogroup group_2156

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2156

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4F0W5 1.92e-145 405 100 0 201 3 slmA Nucleoid occlusion factor SlmA Proteus mirabilis (strain HI4320)
Q7MY26 6.54e-120 340 81 1 201 3 slmA Nucleoid occlusion factor SlmA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B2VF78 6.17e-116 330 81 0 195 3 slmA Nucleoid occlusion factor SlmA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A1JHW9 5.72e-115 328 82 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JQX6 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66GD9 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TSE0 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pestis (strain Pestoides F)
Q1CCZ9 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R671 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZJP6 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pestis
B2JYN0 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C264 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FCT1 9.89e-114 325 81 1 201 3 slmA Nucleoid occlusion factor SlmA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q2NQT9 3.23e-113 323 83 1 201 3 slmA Nucleoid occlusion factor SlmA Sodalis glossinidius (strain morsitans)
C5B9D1 5.9e-113 323 82 1 201 3 slmA Nucleoid occlusion factor SlmA Edwardsiella ictaluri (strain 93-146)
A7MQB0 1.81e-112 322 82 1 198 3 slmA Nucleoid occlusion factor SlmA Cronobacter sakazakii (strain ATCC BAA-894)
A8GLE8 8.29e-112 320 81 0 196 3 slmA Nucleoid occlusion factor SlmA Serratia proteamaculans (strain 568)
B5XTG2 5.83e-111 318 81 1 198 1 slmA Nucleoid occlusion factor SlmA Klebsiella pneumoniae (strain 342)
Q6DAW0 1.36e-110 317 80 1 201 3 slmA Nucleoid occlusion factor SlmA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A6TFN2 7.84e-110 315 80 1 198 1 slmA Nucleoid occlusion factor SlmA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B7LVK2 9.86e-110 315 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q8FC86 9.86e-110 315 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TBG8 9.86e-110 315 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N282 9.86e-110 315 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O81 (strain ED1a)
B7UM47 9.86e-110 315 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
C6DIC4 2.01e-109 314 79 1 201 3 slmA Nucleoid occlusion factor SlmA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
P0C094 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Shigella flexneri
Q0SYG8 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Shigella flexneri serotype 5b (strain 8401)
B2TTV5 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I3L8 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain SE11)
B7NEU5 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0C093 2.24e-109 314 79 1 198 1 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain K12)
B1IYV9 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6A3 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O9:H4 (strain HS)
B1X975 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain K12 / DH10B)
C4ZXN3 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M4C6 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O8 (strain IAI1)
B5YWD9 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X580 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O157:H7
B7L761 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain 55989 / EAEC)
A7ZTJ2 2.24e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O139:H28 (strain E24377A / ETEC)
B1LK78 2.5e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli (strain SMS-3-5 / SECEC)
A1AHH2 2.5e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O1:K1 / APEC
B7NQ02 2.5e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7MFK2 2.5e-109 314 79 1 198 3 slmA Nucleoid occlusion factor SlmA Escherichia coli O45:K1 (strain S88 / ExPEC)
A8ARM8 2.86e-109 313 79 1 198 3 slmA Nucleoid occlusion factor SlmA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A9MKN4 4.38e-109 313 80 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5BI15 1.43e-108 312 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella paratyphi A (strain AKU_12601)
Q5PC27 1.43e-108 312 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZL46 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TZY2 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella schwarzengrund (strain CVM19633)
C0Q1X3 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella paratyphi C (strain RKS4594)
A9MVN6 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4SXE2 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella newport (strain SL254)
B4T9C5 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella heidelberg (strain SL476)
B5RGE6 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R5G5 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella enteritidis PT4 (strain P125109)
B5FM64 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella dublin (strain CT_02021853)
Q57IA1 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella choleraesuis (strain SC-B67)
B5EXE5 2.59e-108 311 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella agona (strain SL483)
Q8Z2H4 5.57e-108 310 79 1 198 3 slmA Nucleoid occlusion factor SlmA Salmonella typhi
A4W508 1.51e-107 309 77 1 198 3 slmA Nucleoid occlusion factor SlmA Enterobacter sp. (strain 638)
Q6LVN6 3.39e-95 278 69 0 192 3 slmA Nucleoid occlusion factor SlmA Photobacterium profundum (strain SS9)
B7VHK0 6.8e-90 265 65 0 192 3 slmA Nucleoid occlusion factor SlmA Vibrio atlanticus (strain LGP32)
Q7MPT0 3.29e-89 263 64 0 192 3 slmA Nucleoid occlusion factor SlmA Vibrio vulnificus (strain YJ016)
Q8DDX7 3.29e-89 263 64 0 192 3 slmA Nucleoid occlusion factor SlmA Vibrio vulnificus (strain CMCP6)
A7MSP5 3.71e-89 263 64 0 192 3 slmA Nucleoid occlusion factor SlmA Vibrio campbellii (strain ATCC BAA-1116)
Q87T90 5.69e-89 262 64 0 192 3 slmA Nucleoid occlusion factor SlmA Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9KVD2 1.06e-87 259 63 0 193 1 slmA Nucleoid occlusion factor SlmA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
B5FFF4 5.69e-86 254 63 0 192 3 slmA Nucleoid occlusion factor SlmA Aliivibrio fischeri (strain MJ11)
Q5E8M7 5.69e-86 254 63 0 192 3 slmA Nucleoid occlusion factor SlmA Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q8E9L9 5.5e-79 237 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
A0L1S2 6.55e-79 237 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella sp. (strain ANA-3)
Q0HZU6 9.39e-79 236 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella sp. (strain MR-7)
Q0HE53 9.39e-79 236 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella sp. (strain MR-4)
A9KY01 2.77e-78 235 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella baltica (strain OS195)
A6WIA3 2.77e-78 235 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella baltica (strain OS185)
A3CZJ3 2.77e-78 235 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella baltica (strain OS155 / ATCC BAA-1091)
B8E4J2 2.77e-78 235 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella baltica (strain OS223)
A1REU1 1.04e-77 234 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella sp. (strain W3-18-1)
A4Y2K8 1.04e-77 234 61 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q07WF8 2.59e-76 230 58 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella frigidimarina (strain NCIMB 400)
Q5QZB7 8.17e-76 229 55 2 200 3 slmA Nucleoid occlusion factor SlmA Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
B1KL08 1.9e-74 225 59 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella woodyi (strain ATCC 51908 / MS32)
F2G1U7 2.92e-74 225 58 1 184 3 slmA Nucleoid occlusion factor SlmA Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype)
A1S2C9 1.39e-73 223 58 1 192 3 slmA Nucleoid occlusion factor SlmA Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
B8CM26 1.62e-73 223 59 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella piezotolerans (strain WP3 / JCM 13877)
B0TQK8 4.34e-73 222 60 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella halifaxensis (strain HAW-EB4)
A8H9B3 4.95e-73 222 60 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
Q12SF8 3.65e-72 219 59 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
A3QIQ2 2.06e-70 215 57 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella loihica (strain ATCC BAA-1088 / PV-4)
A8FQ72 1.1e-69 213 57 1 188 3 slmA Nucleoid occlusion factor SlmA Shewanella sediminis (strain HAW-EB3)
Q48AG4 4.95e-69 212 52 1 194 3 slmA Nucleoid occlusion factor SlmA Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
P29280 2.46e-67 208 52 0 190 3 slmA Nucleoid occlusion factor SlmA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5UI96 2.46e-67 208 52 0 190 3 slmA Nucleoid occlusion factor SlmA Haemophilus influenzae (strain PittGG)
A5UDB3 2.46e-67 208 52 0 190 3 slmA Nucleoid occlusion factor SlmA Haemophilus influenzae (strain PittEE)
Q4QLV2 2.46e-67 208 52 0 190 3 slmA Nucleoid occlusion factor SlmA Haemophilus influenzae (strain 86-028NP)
Q65R67 1.94e-65 203 51 0 191 3 slmA Nucleoid occlusion factor SlmA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q9CLQ9 8.96e-65 201 47 0 194 3 slmA Nucleoid occlusion factor SlmA Pasteurella multocida (strain Pm70)
A6VSX5 8.5e-64 198 52 1 192 3 slmA Nucleoid occlusion factor SlmA Marinomonas sp. (strain MWYL1)
B0BTZ2 1.13e-59 188 47 1 193 3 slmA Nucleoid occlusion factor SlmA Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
B3H337 1.13e-59 188 47 1 193 3 slmA Nucleoid occlusion factor SlmA Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3N3Q5 1.13e-59 188 47 1 193 3 slmA Nucleoid occlusion factor SlmA Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Q7VN48 1.88e-58 185 47 1 193 3 slmA Nucleoid occlusion factor SlmA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
B8F853 8.25e-57 181 48 2 193 3 slmA Nucleoid occlusion factor SlmA Glaesserella parasuis serovar 5 (strain SH0165)
A1U6F3 1.82e-53 172 47 1 188 3 slmA Nucleoid occlusion factor SlmA Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15590
Feature type CDS
Gene slmA
Product nucleoid occlusion factor SlmA
Location 3466656 - 3467261 (strand: -1)
Length 606 (nucleotides) / 201 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2156
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family
PF22276 Tetracyclin repressor-like, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05501 TetR/AcrR family transcriptional regulator - -

Protein Sequence

MAEEKETKKKRRNRRDEILQSLAQMLESSDGSQRITTAKLAATVGVSEAALYRHFPSKTKMFDSLIEFIEDSLVSRINLILKDEKETIARIRLILILILGFAEKNPGLSRILTGHALMFEQDRLQGRINQLYERIEVQLRQVIKERKIREGSAFLHDEALLASQLLAFCEGMLARFVRTEFRYHPTQEFEARWPLIQAQLQ

Flanking regions ( +/- flanking 50bp)

GTGCAAAGGTTTACTGATTTGTTTTGCTTTTAGCAGGGGCCTTATCAGTCATGGCAGAAGAAAAAGAAACCAAAAAGAAACGCAGAAATAGACGGGATGAAATACTACAATCGCTCGCTCAAATGTTGGAGTCTAGTGATGGTAGTCAACGTATTACTACAGCCAAATTAGCGGCTACCGTTGGGGTATCTGAAGCAGCACTTTATCGACATTTCCCCAGTAAAACAAAGATGTTTGATAGCCTAATTGAGTTTATCGAAGATAGCTTAGTTTCGCGTATCAACCTGATTTTAAAAGATGAGAAAGAAACTATCGCGCGCATTCGCCTTATTCTTATCTTGATCCTTGGCTTTGCAGAGAAAAACCCTGGGCTATCTCGCATTCTTACCGGACACGCATTAATGTTTGAGCAAGATAGATTACAAGGGCGCATTAACCAATTGTATGAGCGAATTGAAGTACAACTTCGCCAAGTGATTAAAGAGCGTAAAATTCGCGAAGGAAGTGCCTTTTTACATGATGAAGCATTACTCGCTTCACAACTGCTTGCGTTTTGTGAAGGTATGCTAGCACGTTTTGTACGTACGGAATTTCGTTATCATCCTACACAGGAATTTGAAGCACGTTGGCCATTAATTCAGGCACAATTACAGTGAGCAAGTAACAATGAAAGAGTGGACTCGTGACTTAACTCAATAATTTGAAA