K05499


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05499, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05499
KO K05499
Description LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05499 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_348 PMI_RS15915 3531908 3532939 -1 cytR DNA-binding transcriptional regulator CytR Proteus mirabilis HI4320
1 group_348 FBDBKF_12235 107745 108773 1 cytR DNA-binding transcriptional regulator CytR Morganella morganii S1
2 group_348 EHELCC_14070 25932 26960 -1 cytR DNA-binding transcriptional regulator CytR Morganella morganii S2
3 group_348 NLDBIP_15165 29869 30897 -1 cytR DNA-binding transcriptional regulator CytR Morganella morganii S4
4 group_348 LHKJJB_15445 107745 108773 1 cytR DNA-binding transcriptional regulator CytR Morganella morganii S3
5 group_348 HKOGLL_14565 94408 95436 1 cytR DNA-binding transcriptional regulator CytR Morganella morganii S5
6 group_348 F4V73_RS17065 41433 42458 1 cytR DNA-binding transcriptional regulator CytR Morganella psychrotolerans