K04760


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K04760, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K04760
KO K04760
Description transcription elongation factor GreB

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K04760 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1630 PMI_RS14285 3171371 3171850 1 greB transcription elongation factor GreB Proteus mirabilis HI4320
1 group_1630 FBDBKF_10735 115556 116041 1 greB transcription elongation factor GreB Morganella morganii S1
2 group_1630 EHELCC_15070 115546 116031 1 greB transcription elongation factor GreB Morganella morganii S2
3 group_1630 NLDBIP_14900 115546 116031 1 greB transcription elongation factor GreB Morganella morganii S4
4 group_1630 LHKJJB_14445 25695 26180 -1 greB transcription elongation factor GreB Morganella morganii S3
5 group_1630 HKOGLL_13065 25695 26180 -1 greB transcription elongation factor GreB Morganella morganii S5
6 group_1630 F4V73_RS14450 119346 119831 1 greB transcription elongation factor GreB Morganella psychrotolerans