K03628


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03628, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03628
KO K03628
Description transcription termination factor Rho

KO part of 1 pathways

RNA degradation

KO part of 0 modules

Occurence in the database

K03628 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1327 PMI_RS16475 3633442 3634701 1 rho transcription termination factor Rho Proteus mirabilis HI4320
1 group_1327 FBDBKF_08215 20281 21540 1 rho transcription termination factor Rho Morganella morganii S1
2 group_1327 EHELCC_13310 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S2
3 group_1327 NLDBIP_13650 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S4
4 group_1327 LHKJJB_12905 18999 20258 1 rho transcription termination factor Rho Morganella morganii S3
5 group_1327 HKOGLL_12125 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S5
6 group_1327 F4V73_RS18765 21442 22701 1 rho transcription termination factor Rho Morganella psychrotolerans