K03554


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03554, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03554
KO K03554
Description recombination associated protein RdgC

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K03554 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2271 PMI_RS00210 64753 65661 -1 rdgC recombination-associated protein RdgC Proteus mirabilis HI4320
1 group_2271 FBDBKF_17460 26596 27504 1 rdgC recombination-associated protein RdgC Morganella morganii S1
2 group_2271 EHELCC_17355 26596 27504 1 rdgC recombination-associated protein RdgC Morganella morganii S2
3 group_2271 NLDBIP_17840 15292 16200 -1 rdgC recombination-associated protein RdgC Morganella morganii S4
4 group_2271 LHKJJB_17760 15290 16198 -1 rdgC recombination-associated protein RdgC Morganella morganii S3
5 group_2271 HKOGLL_17770 15290 16198 -1 rdgC recombination-associated protein RdgC Morganella morganii S5
6 group_2271 F4V73_RS16635 150602 151510 1 rdgC recombination-associated protein RdgC Morganella psychrotolerans