K03340


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03340, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03340
KO K03340
Description diaminopimelate dehydrogenase [EC:1.4.1.16]

KO part of 4 pathways

Lysine biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids

KO part of 1 modules

M00526 Lysine metabolism Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

Occurence in the database

K03340 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1292 PMI_RS00725 186853 187752 1 diaminopimelate dehydrogenase Proteus mirabilis HI4320
1 group_1292 FBDBKF_07865 101610 102569 1 lys9 diaminopimelate dehydrogenase Morganella morganii S1
2 group_1292 EHELCC_13695 75804 76763 1 lys9 diaminopimelate dehydrogenase Morganella morganii S2
3 group_1292 NLDBIP_14140 96679 97638 1 lys9 diaminopimelate dehydrogenase Morganella morganii S4
4 group_1292 LHKJJB_08710 62111 63070 -1 lys9 diaminopimelate dehydrogenase Morganella morganii S3
5 group_1292 HKOGLL_08260 62111 63070 -1 lys9 diaminopimelate dehydrogenase Morganella morganii S5
6 group_1292 F4V73_RS13155 247855 248748 -1 diaminopimelate dehydrogenase Morganella psychrotolerans