K02878


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K02878, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K02878
KO K02878
Description large subunit ribosomal protein L16

KO part of 1 pathways

Ribosome

KO part of 0 modules

Occurence in the database

K02878 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2392 PMI_RS16185 3586498 3586908 1 rplP 50S ribosomal protein L16 Proteus mirabilis HI4320
1 group_2392 FBDBKF_19210 18912 19322 -1 rplP 50S ribosomal protein L16 Morganella morganii S1
2 group_2392 EHELCC_18955 18912 19322 -1 rplP 50S ribosomal protein L16 Morganella morganii S2
3 group_2392 NLDBIP_18970 18912 19322 -1 rplP 50S ribosomal protein L16 Morganella morganii S4
4 group_2392 LHKJJB_18825 18912 19322 -1 rplP 50S ribosomal protein L16 Morganella morganii S3
5 group_2392 HKOGLL_18560 18912 19322 -1 rplP 50S ribosomal protein L16 Morganella morganii S5
6 group_2392 F4V73_RS18955 11016 11426 1 rplP 50S ribosomal protein L16 Morganella psychrotolerans