K01998


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01998, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01998
KO K01998
Description branched-chain amino acid transport system permease protein

KO part of 2 pathways

ABC transporters
Quorum sensing

KO part of 0 modules

Occurence in the database

K01998 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2606 FBDBKF_03470 99205 100488 -1 livM ABC-type branched-chain amino acid transport system, permease component Morganella morganii S1
1 group_2606 EHELCC_07065 146615 147898 1 livM ABC-type branched-chain amino acid transport system, permease component Morganella morganii S2
2 group_2606 NLDBIP_07390 146488 147771 1 livM ABC-type branched-chain amino acid transport system, permease component Morganella morganii S4
3 group_2606 LHKJJB_06925 110234 111517 1 livM ABC-type branched-chain amino acid transport system, permease component Morganella morganii S3
4 group_2606 HKOGLL_04005 121870 123153 -1 livM ABC-type branched-chain amino acid transport system, permease component Morganella morganii S5
5 group_2606 F4V73_RS11425 428177 429460 1 high-affinity branched-chain amino acid ABC transporter permease LivM Morganella psychrotolerans