K01928


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01928, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01928
KO K01928
Description UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

KO part of 3 pathways

Lysine biosynthesis
Peptidoglycan biosynthesis
Metabolic pathways

KO part of 0 modules

Occurence in the database

K01928 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_862 PMI_RS10225 2239305 2240792 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase Proteus mirabilis HI4320
1 group_862 FBDBKF_04360 61575 63062 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase Morganella morganii S1
2 group_862 EHELCC_05650 121032 122519 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase Morganella morganii S2
3 group_862 NLDBIP_05970 162097 163584 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase Morganella morganii S4
4 group_862 LHKJJB_02850 139621 141108 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase Morganella morganii S3
5 group_862 HKOGLL_06325 61485 62972 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase Morganella morganii S5
6 group_862 F4V73_RS08805 1822695 1824182 -1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase Morganella psychrotolerans