Orthogroup:group_931



Homologs in group_931

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05055 FBDBKF_05055 Morganella morganii S1 nth endonuclease III
EHELCC_12535 EHELCC_12535 Morganella morganii S2 nth endonuclease III
NLDBIP_12875 NLDBIP_12875 Morganella morganii S4 nth endonuclease III
LHKJJB_12735 LHKJJB_12735 Morganella morganii S3 nth endonuclease III
HKOGLL_11350 HKOGLL_11350 Morganella morganii S5 nth endonuclease III
F4V73_RS05495 F4V73_RS05495 Morganella psychrotolerans nth endonuclease III
PMI_RS06320 PMI_RS06320 Proteus mirabilis HI4320 nth endonuclease III

Distribution of group_931 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_931 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_931

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_931.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nth 7

Product

# Product Occurence
1 endonuclease III 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0177 7 L Replication, recombination and repair (L) Endonuclease III

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10773 7 endonuclease III [EC:3.2.2.- 4.2.99.18] Base excision repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00633 7 Helix-hairpin-helix motif
PF00730 7 HhH-GPD superfamily base excision DNA repair protein
PF10576 7 Iron-sulfur binding domain of endonuclease III

Annotations of the 50 SwissProt hits

Annotation Number of occurrences
Adenine DNA glycosylase 14
Endonuclease III 19
Endonuclease III homolog 4
Endonuclease III homolog 1 1
Endonuclease III homolog 1, chloroplastic 1
Endonuclease III homolog 2 1
Endonuclease III homolog 2, chloroplastic 1
Endonuclease III-like protein 1 4
Putative DNA glycosylase At3g47830 1
Thymine-DNA glycosylase 1
Thymine/uracil-DNA glycosylase 2
Ultraviolet N-glycosylase/AP lyase 1

Protein length

Min length 212
Max length 213
Mean length (sd) 212.9 (0.4)
Median length 213.0

Protein length distribution